Biochemistry · Enzyme
ATP synthase (complex V) !
ATP synthase is a molecular motor: protons flowing back into the matrix spin it, and each turn makes ATP from ADP and phosphate.
Updated 2026-11-01
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Key facts
- Two parts: Fo, the proton channel with a c-ring that spins in the membrane, and F1 (α₃β₃γδε), the head in the matrix that makes ATP.
- Binding-change mechanism (Boyer): each β subunit cycles through three states (open, loose, tight); one full turn releases 3 ATP.
- In mammals the c-ring has 8 subunits: about 8 H⁺ per turn, roughly 2.7 H⁺ per ATP plus one to bring in phosphate.
- Oligomycin plugs the Fo channel: ATP synthesis stops and, through respiratory control, so does the chain.
- Also called
- F₀F₁-ATPase, Complex V
- EC number
- 7.1.2.2
- Genes
- ATP5F1A, ATP5F1B, MT-ATP6, MT-ATP8…
- Structure (PDB)
- 1BMF
Regulation
- IF1 restrains it when the gradient collapses (ischemia), so it does not waste ATP running backwards.
- Availability of ADP and phosphate drives it.
Inhibitors and toxins
- Oligomycin
- Aurovertin
- Dicyclohexylcarbodiimide (DCCD)
Clinical notes
- MT-ATP6 variants cause NARP or Leigh syndrome depending on the share of mutant copies (heteroplasmy).
- Bacteria use the same machine; bedaquiline, for drug-resistant tuberculosis, blocks the mycobacterial ATP synthase.
Pathways
Related conditions
Related
- ATP (adenosine triphosphate)
- Chemiosmosis and the proton gradient
- Uncouplers of oxidative phosphorylation
- UCP1 (thermogenin)
- Cytochrome c oxidase (complex IV)
Test yourself
Think of the answer, then tap the question to see it.
Which part of ATP synthase spins as protons pass?
The c-ring of the Fo sector, attached to the γ shaft, which turns inside the α₃β₃ head of F1.
What is the binding-change mechanism?
Each β subunit cycles through open, loose and tight states; the turning γ shaft changes its shape and releases the ATP already made.
Which inhibitor blocks the Fo channel of ATP synthase?
Oligomycin; it also slows the respiratory chain through respiratory control.
Which tuberculosis drug acts on the bacterial ATP synthase?
Bedaquiline, used in multidrug-resistant tuberculosis.
Educational information, not medical advice. For any symptom, see a health professional.
Sources: ATP5F1B: ATP synthase F(1) complex subunit beta, mitochondrial (human) (UniProt, 2026); 1BMF: BOVINE MITOCHONDRIAL F1-ATPASE (RCSB Protein Data Bank, 2026); MT-ATP6 gene: MedlinePlus Genetics (MedlinePlus, US National Library of Medicine, 2026); Formation of ATP by chemiosmotic coupling (Reactome, 2026).
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Representative model, for educational purposes only.