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Pyruvate dehydrogenase complex (PDH) !

Pyruvate dehydrogenase is the gate between glycolysis and the Krebs cycle; it needs five coenzymes and four B vitamins.

Updated 2026-10-31

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Key facts

  • Pyruvate + CoA + NAD⁺ → acetyl-CoA + CO₂ + NADH; irreversible.
  • Three enzymes in one giant complex: E1 (with thiamine pyrophosphate), E2 (with lipoic acid, adds CoA) and E3 (with FAD, regenerates lipoate and reduces NAD⁺).
  • Coenzymes: thiamine pyrophosphate (B1), lipoic acid, CoA (B5), FAD (B2), NAD⁺ (B3).
  • E3 is shared with α-ketoglutarate dehydrogenase and the branched-chain keto acid dehydrogenase.
EC number
1.2.4.1
Genes
PDHA1, PDHB, DLAT, DLD
Structure (PDB)
1NI4

Regulation

  • Its products (acetyl-CoA, NADH) inhibit it.
  • PDH kinase phosphorylates and switches it off; PDH phosphatase (Ca²⁺, insulin) switches it back on. Dichloroacetate inhibits the kinase.

Inhibitors and toxins

  • Arsenite and other compounds that trap lipoic acid
  • Thiamine lack

Clinical notes

  • PDH deficiency (usually PDHA1, X-linked) causes lactic acidosis with a normal lactate/pyruvate ratio and Leigh syndrome.
  • The ketogenic diet gives the brain a fuel that bypasses PDH.
  • Giving glucose without thiamine to a malnourished patient can trigger Wernicke encephalopathy.

Pathways

Test yourself

Think of the answer, then tap the question to see it.

What are PDH's five coenzymes?

Thiamine pyrophosphate, lipoic acid, coenzyme A, FAD and NAD⁺.

How is PDH switched off when energy is plentiful?

PDH kinase phosphorylates it; ATP, NADH and acetyl-CoA activate that kinase.

Why is thiamine given before glucose to a patient with alcohol use disorder?

Without thiamine PDH fails; a glucose load uses up the little thiamine left and can trigger Wernicke.

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Educational information, not medical advice. For any symptom, see a health professional.

Sources: PDHA1: Pyruvate dehydrogenase E1 component subunit alpha (human) (UniProt, 2026); Pyruvate dehydrogenase deficiency: MedlinePlus Genetics (MedlinePlus, US National Library of Medicine, 2026); Pyruvate metabolism (Reactome, 2026); 1NI4: Human pyruvate dehydrogenase (RCSB Protein Data Bank, 2026).

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Representative model, for educational purposes only.